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#1

beta_#1

beta_2025-08-25

beta_2025-09-02

beta_2025-09-04

beta_2025-09-18

beta_2025-10-15

beta_2025-11-12

pre_frontpage_update

b12c2dda69 wip develop-bayer Tim Lorsbach 2026-09-08 15:11:47 +02:00
0b325a30b7 updated add if dep Tim Lorsbach 2026-09-03 12:04:14 +02:00
d8741c5375 wip Tim Lorsbach 2026-09-02 21:34:26 +02:00
887de03a19 reactionSmarts Tim Lorsbach 2026-09-02 21:30:53 +02:00
b54c8eaab6 minor Tim Lorsbach 2026-08-28 13:14:43 +02:00
f885745127 Fix import Tim Lorsbach 2026-08-27 11:46:08 +02:00
48d2bce52a minor Tim Lorsbach 2026-08-20 09:28:23 +02:00
67aa3731cb PES Adjustments, Check is User is in enviPath Entra Group Tim Lorsbach 2026-08-20 08:59:24 +02:00
0033513d99 adjusted migration Tim Lorsbach 2026-03-06 15:15:08 +01:00
fedd1b5280 [Feature] Management Command to Compute and Store Reaction <-> Rule Associations (#453) develop jebusandTim Lorsbach 2026-08-14 20:45:12 +12:00
2d3dca6a75 [Fix] Adjust Rules according to manual QA, Add missing Rule (#452) jebusandTim Lorsbach 2026-08-13 17:37:38 +12:00
ada270aa3c [Fix] Canonicalize SMILES when checking overlaps in smiles_covered_by (#443) jebusandTim Lorsbach 2026-08-12 21:01:41 +12:00
093daa5ecf [Fix] 'Object of type ConfidenceLevel is not JSON serializable' in Pathway.d3_json (#450) jebusandTim Lorsbach 2026-08-07 19:58:36 +12:00
f4f284925a [Fix] Entrypoint Location (#446) jebusandTim Lorsbach 2026-08-05 09:15:09 +12:00
ca6e926b30 [Fix] Fix Image Tags (#445) jebusandTim Lorsbach 2026-08-05 08:55:35 +12:00
2504d7045b [Chore] Build Docker Images on pushes to develop, main (#444) jebusandTim Lorsbach 2026-08-05 08:36:24 +12:00
032ebc30a2 [Fix] Return a File instead of raw text for new export endpoint (#442) jebusandTim Lorsbach 2026-07-31 08:24:14 +12:00
703f377b7f [Fix] Export IUCLID Properties, Show Model Params and Statistics, Adjust Batch Prediction Settings (#434) jebusandTim Lorsbach 2026-07-30 08:30:18 +12:00
7639b23e4e [Feature] Package Pathway Export to CSV (#439) jebusandTim Lorsbach 2026-07-30 08:03:01 +12:00
7632b3a029 [Fix] All thresholds, Increase Batch Predict Limit, Make "Back" Button on error page trigger a new pageload. (#432) jebusandTim Lorsbach 2026-07-24 09:29:05 +12:00
d657c0285a [Fix] Catch invalid reactions smiles on reaction creation (#431) jebusandTim Lorsbach 2026-07-23 07:45:36 +12:00
f4c198981b [Feature] SPathway to_json outputs Bayes Probabilities (#430) jebusandTim Lorsbach 2026-07-23 07:20:26 +12:00
cdd51fc7aa [Fix] Iuclid export produce only one root substance (#429) t03i 2026-07-23 06:37:02 +12:00
ac8df05913 [Feature] Attach AdditionalInformation to Nodes (#428) jebusandTim Lorsbach 2026-07-20 09:32:28 +12:00
31c57299e4 [Feature] Ketcher V3 (#427) jebusandTim Lorsbach 2026-07-17 08:16:09 +12:00
3566571b42 [Chore] Leftovers (#426) jebusandTim Lorsbach 2026-07-16 21:33:12 +12:00
72a63b4876 [Feature] Sync Features from Client Repo (#425) jebusandTim Lorsbach 2026-07-16 07:50:46 +12:00
2c2437e3f5 [Feature] Generate Compounds by Molfile (#423) jebusandTim Lorsbach 2026-07-15 23:56:24 +12:00
9bc9f86ff1 [Fix] Pathway SVG Export has Edges again, Fix In/Out Edge coloring (#422) jebusandTim Lorsbach 2026-07-03 07:24:02 +12:00
dba6514013 [Chore] Package Export, Blanks for fields, Styling (#421) jebusandTim Lorsbach 2026-07-02 20:12:26 +12:00
a092d4a558 [Chore] Updated Dockerfile (#418) jebusandTim Lorsbach 2026-06-17 08:33:02 +12:00
2502c020f7 [Fix] Collection of minor Bugfixes (#417) jebusandTim Lorsbach 2026-06-17 07:56:32 +12:00
6ab9180291 [Feature] Vizualize Reaction Circles (#410) jebusandTim Lorsbach 2026-06-11 02:07:49 +12:00
3657d14659 [Fix] Cascade deletion of Reactions to Edges (#409) jebusandTim Lorsbach 2026-06-11 00:24:06 +12:00
ef6091d416 [Fix] Set depth to -1 when adding a Node via Pathway.add_node to be in sync with legacy_api (#408) jebusandTim Lorsbach 2026-06-09 23:55:16 +12:00
14cfc1e4d7 [Feature] Integrate DOI Links, Handle Cycles in Pathway Viz (#407) jebusandTim Lorsbach 2026-06-03 06:00:38 +12:00
868bbf5c05 [Fix] False as multi_step default in legacy API (#406) jebusandTim Lorsbach 2026-05-29 08:12:52 +12:00
be5ee1d1d7 [Fix] Propagate multi_step in Edge.create to Reaction.create to ensure deduplication is working (#405) jebusandTim Lorsbach 2026-05-29 07:39:32 +12:00
20fd949dfd [Fix] Implement legacy PFASConfidence object construction (#404) jebusandTim Lorsbach 2026-05-28 23:57:34 +12:00
c9b643fe6e [Feature] Make JobLog Page Paginated (#403) jebusandTim Lorsbach 2026-05-28 23:01:27 +12:00
1a9f1cf9af [Fix] Legacy API Node Depth Parsing, description validation in Reaction.create (#402) jebusandTim Lorsbach 2026-05-28 09:53:39 +12:00
c7c7e17e43 [Feature] Implement legacy endpoints to enable copy via python client (#400) jebusandTim Lorsbach 2026-05-28 01:41:28 +12:00
674e10c7fa [Fix] Legacy API Package Endpoint, Pepper Unit in Pathway View (#399) jebusandTim Lorsbach 2026-05-27 21:09:17 +12:00
8079b80d57 [Fix] Fix Typo in multi_step assignment (#397) jebusandTim Lorsbach 2026-05-21 09:56:21 +12:00
76e63fda2c [Fix] Fix BART Upload (#396) jebusandTim Lorsbach 2026-05-21 03:16:02 +12:00
1e43c298d2 [Fix] Simplify Depth adjustment (#386) jebusandTim Lorsbach 2026-05-12 21:04:56 +12:00
b39fc7eaf8 [Fix] Update Node depth when adding new Edges to a Pathway (#384) jebusandTim Lorsbach 2026-05-12 09:40:35 +12:00
a2fc9f72cb [Feature] Make use of HalfLifeModel Enum (#383) jebusandTim Lorsbach 2026-05-12 09:23:56 +12:00
734b02767e [Fix] Update plotting imports and thread handling in Pepper class (#382) t03i 2026-05-12 06:43:26 +12:00
9d70db2ca2 [Fix] Wrong indentation in welcome mail (#373) jebusandTim Lorsbach 2026-04-22 08:47:05 +12:00
fec26d0233 [Feature] Admin Actions for Activation and Affiliation Request (#372) jebusandTim Lorsbach 2026-04-22 08:36:31 +12:00
689f7998eb [Dep] Updated enviFormer, additional information lib, aiohttp, fsspec (#371) jebusandTim Lorsbach 2026-04-22 06:38:31 +12:00
8498e59fa1 [Feature] Changes required for non public tenants (#370) jebusandTim Lorsbach 2026-04-22 06:08:39 +12:00
b508511cd6 Implement basic group listing and re-enabled group creation Tim Lorsbach 2026-04-14 20:58:12 +02:00
877804c0ff [Feature] Path prefixes (#369) jebusandTim Lorsbach 2026-04-14 21:59:29 +12:00
964574c700 [Feature] Biotransformer in enviPath (#364) jebusandTim Lorsbach 2026-04-10 00:00:13 +12:00
5029a8cda5 [Feature] Dockerized Setup (#366) jebusandTim Lorsbach 2026-04-07 20:06:46 +12:00
d06bd0d4fd [Feature] Minimal IUCLID export (#338) t03i 2026-04-07 19:46:12 +12:00
f7c45b8015 [Feature] Add legacy api endpoint to mimic ReferringScenarios (#362) jebusandTim Lorsbach 2026-03-17 19:44:47 +13:00
68aea97013 [Feature] Simple template extension mechanism (#361) jebusandTim Lorsbach 2026-03-16 21:06:20 +13:00
3cc7fa9e8b [Fix] Add Captcha vars to Template (#359) jebusandTim Lorsbach 2026-03-13 11:46:34 +13:00
21f3390a43 [Feature] Add Captchas to avoid spam registrations (#358) jebusandTim Lorsbach 2026-03-13 11:36:48 +13:00
8cdf91c8fb [Fix] Broken Model Creation (#356) jebusandTim Lorsbach 2026-03-12 11:34:14 +13:00
bafbf11322 [Fix] Broken Enzyme Links (#353) jebusandTim Lorsbach 2026-03-12 10:25:47 +13:00
f1a9456d1d [Fix] enviFormer prediction (#352) jebusandTim Lorsbach 2026-03-12 08:49:44 +13:00
e0764126e3 [Fix] Scenario Review Status + Depth issues (#351) jebusandTim Lorsbach 2026-03-12 08:28:20 +13:00
ef0c45b203 [Fix] Pepper display probability calculation (#349) liambrydon 2026-03-11 19:12:55 +13:00
b737fc93eb [Feature] Search for Permissions, Prep Compound / Structure to be extended, Prep Template overwrites (#347) jebusandTim Lorsbach 2026-03-11 11:27:15 +13:00
d4295c9349 [Fix] bootstrap command now reflects new Scenario/AdditionalInformation structure (#346) jebusandTim Lorsbach 2026-03-07 03:14:28 +13:00
c6ff97694d [Feature] PEPPER in enviPath (#332) jebusandTim Lorsbach 2026-03-06 22:11:22 +13:00
6e00926371 [Feature] Scenario and Additional Information creation via enviPath-python, Add Half Lifes to API Output, Fix source/target ids in legacy API (#340) jebusandTim Lorsbach 2026-03-06 07:20:18 +13:00
81cc612e69 [Feature] Populate Batch Predict Table by CSV (#339) jebusandTim Lorsbach 2026-03-06 03:15:44 +13:00
cc9598775c [Fix] Fix Perm for creating entities (#341) jebusandTim Lorsbach 2026-02-27 03:56:33 +13:00
d2c2e643cb [Fix] Compound Grouping, Identity prediction of enviFormer, Setting params (#337) jebusandTim Lorsbach 2026-02-20 10:14:28 +13:00
0ff046363c [Fix] Fixed failing frontend tests due to renaming (#335) jebusandTim Lorsbach 2026-02-17 03:09:32 +13:00
5150027f0d [Fix] Login via email, prevent Usernames with certain chars Tim Lorsbach 2026-02-16 13:58:06 +01:00
58ab5b33e3 [Fix] Filter Active Users (#314) (#329) liambrydon 2026-02-12 20:20:16 +13:00
73f0202267 [Fix] Filter Scenarios with Parent (#311) (#323) liambrydonandTim Lorsbach 2026-02-11 23:19:20 +13:00
27c5bad9c5 [Fix] Upgraded ai-lib, temporarily ignore additional validation errors (#328) jebusandTim Lorsbach 2026-02-11 03:49:20 +13:00
5789f20e7f [Feature] Create API Key Authenticaton for v1 API (#327) t03i 2026-02-11 02:29:54 +13:00
c0cfdb9255 [Style] Adds custom name display for timeseries (#320) t03iandjebus 2026-02-04 08:15:16 +13:00
5da8dbc191 [Feature] Timeseries Pathway view (#319)
t03i jebus Tim Lorsbach
2026-02-04 05:19:25 +13:00
dc18b73e08 [Feature] Adds timeseries display (#313) t03i 2026-02-04 01:01:06 +13:00
d80dfb5ee3 [Feature] Dynamic additional information rendering in frontend (#282) t03i 2026-01-31 00:44:03 +13:00
9f63a9d4de [Fix] Fixed ObjectDoesNotExist for send_registration_mail, fixed duplicate mail sending (#312) jebusandTim Lorsbach 2026-01-29 20:24:11 +13:00
5565b9cb9e [Fix] UI bugs, Registrations Mail, BTRules Popup, Legacy API fixes (#309) jebusandTim Lorsbach 2026-01-29 11:13:34 +13:00
ab0b5a5186 [Feature] Leftovers after Release (#303) jebusandTim Lorsbach 2026-01-22 10:26:38 +13:00
f905bf21cf [Feature] Update ToS to be more legally safe and sensible (#301) t03i 2026-01-20 03:18:40 +13:00
1fd993927c [Feature] Check os.environ for ENV_PATH (#300) jebusandTim Lorsbach 2026-01-19 23:41:43 +13:00
2a2fe4f147 Static pages update (#299) liambrydonandt03i 2026-01-19 23:37:08 +13:00
5f5ae76182 [Fix] Fix Prediction Spinner, ensure proper pathway status is set t03i 2026-01-15 23:09:12 +13:00
1c2f70b3b9 [Feature] Add batch-predict to site-map (#285) t03i 2026-01-15 22:30:31 +13:00
54f8302104 [FIX] Fixed Search Output, Legacy API Model Endpoint, Handle ObjectsDoesNotExists in views (#297) jebusandTim Lorsbach 2026-01-15 20:39:54 +13:00
6499a0c659 [Feature] Prediction settings list on User page (#276) liambrydonandTim Lorsbach 2025-12-20 03:19:31 +13:00
7c60a28801 [Feature] Threshold Warning + Cosmetics (#277) jebusandTim Lorsbach 2025-12-20 02:11:47 +13:00
a4a4179261 [Fix] Added libglib2.0 (#280) jebusandTim Lorsbach 2025-12-20 01:26:25 +13:00
6ee4ac535a [Fix] Added libfreetype6 and libcairo2 (#279) jebusandTim Lorsbach 2025-12-20 00:26:23 +13:00
d6065ee888 [Fix] Add libxrender, libxext6 and libfontconfig1 libs to envipy image (#278) jebusandTim Lorsbach 2025-12-19 23:03:02 +13:00
9db4806d75 [Chore] Add custom CI Docker image with Node.js 24, pnpm 10, and uv (#268) t03iandjebus 2025-12-17 23:06:58 +13:00
4bf20e62ef [Fix] UI Fixes (#266) liambrydonandt03i 2025-12-15 21:28:43 +13:00

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