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refactor/html_formatting

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• cfd8d7440b Merge remote-tracking branch 'origin/develop' into enhancement/dataset Liam Brydon 2025-11-07 08:28:03 +13:00
• 6a5413b492 pyproject.toml update and merge from develop Liam Brydon 2025-11-07 08:09:06 +13:00
• 8282855975 add compatibility with Descriptor objects. Liam Brydon 2025-11-06 10:42:32 +13:00
• f5133c1980 fix: remove obsolete page id t03i 2025-11-06 10:36:04 +13:00
• 2194b097ae remove 'a' from allowed html tags Liam Brydon 2025-11-06 10:33:22 +13:00
• 09ddd46d69 app domain assess and assess_batch. Add threshold check for compatability Liam Brydon 2025-11-06 10:32:21 +13:00
• 4524b8fdf3 moved cleaning to create where possible. Changed nh_safe to safe as we assume everything was cleaned in the first place Liam Brydon 2025-11-06 09:46:30 +13:00
• 7fbc49afd3 chore: update citations t03i 2025-11-05 17:50:56 +13:00
• a087a518f6 chore: remove incorrect license header t03i 2025-11-05 17:39:21 +13:00
• 881e0e6798 chore: fix typo t03i 2025-11-05 17:38:52 +13:00
• 2eab66e9ee refactor: added meta.site_id for matomo t03i 2025-11-05 17:37:44 +13:00
• ab927b11a2 refactor: remove dependency-groups t03i 2025-11-05 17:36:43 +13:00
• fde60c3ad3 refactor: remove optional stubs t03i 2025-11-05 17:35:45 +13:00
• 61a43da822 refactor: set enviformer to main t03i 2025-11-05 17:34:31 +13:00
• 211ebfd19b refactor: remove enviformer loading in settings t03i 2025-11-05 17:33:41 +13:00
• 06a6c23d05 fix: add tailwindcss/cli t03i 2025-11-05 17:30:15 +13:00
• 3536a14e47 Merge remote-tracking branch 'origin/develop' into feature/frontend_update t03i 2025-11-05 17:25:27 +13:00
• 9f0e396437 ... Liam Brydon 2025-11-05 13:30:03 +13:00
• 5dc4c822c4 simple implementation for other feature types #120 Liam Brydon 2025-11-05 13:11:40 +13:00
• f1f7ce344c finished app domain conversion #120 Liam Brydon 2025-11-05 12:41:33 +13:00
• 98d62e1d1f [Feature] Make Matomo Site ID configurable via .env (#183) jebusandTim Lorsbach 2025-11-05 10:19:07 +13:00
• 04f9c9252a ... feature/engineered_pathways Tim Lorsbach 2025-11-04 10:15:06 +01:00
• 7eb4029ac9 refactor: add public_mode for static pages to remove nav elements t03i 2025-11-04 19:34:04 +13:00
• 7b38fc2e37 fix: remove jobs clash t03i 2025-11-04 19:33:31 +13:00
• 13af49488e starting on app domain with new dataset #120 Liam Brydon 2025-11-04 16:33:56 +13:00
• ac5d370b18 new RuleBasedDataset and EnviFormer dataset working for respective models #120 Liam Brydon 2025-11-04 10:58:16 +13:00
• ff51e48f90 work towards #120 Liam Brydon 2025-11-03 15:24:28 +13:00
• c2d45917ce clean up d3_json Tim Lorsbach 2025-10-31 09:38:41 +01:00
• 4834348454 Merge remote-tracking branch 'origin/develop' into feature/frontend_update t03i 2025-10-30 14:02:57 +13:00
• 62e890245e ... feature/tenants Tim Lorsbach 2025-10-29 20:00:41 +01:00
• 138846d84d ... Tim Lorsbach 2025-10-29 19:46:20 +01:00
• 13ed86a780 [Feature] Identify Missing Rules (#177) jebus 2025-10-30 00:47:45 +13:00
• f1b4c5aadb [Feature] Adding list_display to various django admin sites (#180) jebusandTim Lorsbach 2025-10-29 22:26:28 +13:00
• 0a52b12f02 fix: handle line-clamp issue with news t03i 2025-10-29 19:59:45 +13:00
• 14571d23a6 docs: add pnpm note t03i 2025-10-29 18:23:28 +13:00
• ea8475f0e2 docs: update README regarding dev command t03i 2025-10-29 18:07:56 +13:00
• 442d139217 chore: remove obsolete doc t03i 2025-10-29 18:06:21 +13:00
• 1ba511a31d chore: minimize fallback data t03i 2025-10-29 18:02:30 +13:00
• 5d89341955 chore: delete obsolete runserver command t03i 2025-10-29 18:01:21 +13:00
• 5f390ac2d2 fix: reenable modal showing t03i 2025-10-29 17:52:10 +13:00
• 46d21e60d2 chore: add example input to search t03i 2025-10-29 16:33:22 +13:00
• 13be240226 feat: working search redirect t03i 2025-10-29 16:30:00 +13:00
• 167a72f5a3 fix: remove obsolete menu list t03i 2025-10-29 16:00:57 +13:00
• 1736319bd7 style: update navbar and add browse back t03i 2025-10-29 15:58:17 +13:00
• e87aae6bf7 style: add legal footers on login t03i 2025-10-29 12:16:42 +13:00
• 253523c81f feat: add mock legal (impressum page) t03i 2025-10-29 12:16:24 +13:00
• 15809a4ccf style: update login pages t03i 2025-10-29 12:01:35 +13:00
• b7e1dac66a feat: add mockup for static pages t03i 2025-10-29 11:13:31 +13:00
• 849ebbe7f8 style: update hero t03i 2025-10-29 11:13:07 +13:00
• c5dcb36452 fix: dev command working t03i 2025-10-29 10:57:51 +13:00
• 37e0e18a28 [Fix] Fixed Incremental Prediction Typo (#176) jebusandTim Lorsbach 2025-10-28 23:29:08 +13:00
• de44c22606 [Migration] Added missing Migration for JobLog (#175) jebusandTim Lorsbach 2025-10-27 22:41:16 +13:00
• a952c08469 [Feature] Basic logging of Jobs, Model Evaluation (#169) jebusandTim Lorsbach 2025-10-27 22:34:05 +13:00
• 8166df6f39 work towards #120 Liam Brydon 2025-10-24 14:40:26 +13:00
• 551cfc7768 [Enhancement] Create ML Models (#173) liambrydonandLiam Brydon 2025-10-23 06:20:22 +13:00
• 16a991220a Slim down Navbar t03i 2025-10-22 12:10:46 +13:00
• 05c8e130b1 Add documentation link t03i 2025-10-22 12:08:31 +13:00
• 4fd7856043 Remove fields from navbar t03i 2025-10-22 12:07:55 +13:00
• f5efaf1b3f Change to icon help button t03i 2025-10-22 12:07:42 +13:00
• 4a2ef3a237 Add search icon mockup t03i 2025-10-22 11:37:23 +13:00
• d097013853 Add discourse API for better data retrieval t03i 2025-10-22 11:37:13 +13:00
• 63cc7cf460 Change partners location t03i 2025-10-22 11:36:25 +13:00
• c663eaf7bd comment Liam Brydon 2025-10-22 10:55:49 +13:00
• ec0fc8cdc1 add error for username/email containing html. Removed checks for SMILES/SMARTS. Updated html to use the nh_safe template tag. #72 Liam Brydon 2025-10-22 10:47:35 +13:00
• 8fda2577ee [Feature] Dump/Restore of enviFormer Models (#170) jebusandTim Lorsbach 2025-10-22 10:39:22 +13:00
• 2980a75daa start towards #120 Liam Brydon 2025-10-22 08:22:29 +13:00
• 819a94aced [Fix] Catch Exception for Adding Structures / Show PubChem Substances (#168) jebusandTim Lorsbach 2025-10-22 01:13:06 +13:00
• 9ca94eeb42 Add initial design suggestion index page t03i 2025-10-21 17:09:40 +13:00
• 61346c4097 nh3 clean is now used on all free-text fields to ensure only approved html will be saved to the database. #72 Liam Brydon 2025-10-21 10:09:10 +13:00
• 43bce8a4e1 added nh_safe filter in envipytags.py and updated some of the existing 'safe' to 'nh_safe' Liam Brydon 2025-10-21 09:10:28 +13:00
• de1dc75a12 Add styled footer t03i 2025-10-20 22:30:11 +13:00
• 43a034427d Add optimized logo components t03i 2025-10-20 22:25:30 +13:00
• d98b60fc57 Add better image t03i 2025-10-17 23:25:55 +13:00
• 86c3f9b808 Improve search look t03i 2025-10-17 22:45:16 +13:00
• 4408a09e82 Add basic index redesign t03i 2025-10-17 22:33:06 +13:00
• f5889b270a New Layout for parallel styling t03i 2025-10-17 20:25:50 +13:00
• 376fd65785 [Feature] ML model caching for reducing prediction overhead (#156) liambrydonandLiam Brydon 2025-10-16 08:58:36 +13:00
• d5ebb23622 [Fix] AppDomain Leftovers (#161) beta_2025-10-15 jebusandTim Lorsbach 2025-10-16 08:17:39 +13:00
• 93dd811e39 [Fix] Pathway SVG Export (#157) jebusandTim Lorsbach 2025-10-16 02:25:30 +13:00
• 9a4735246f [Fix] Fix for sending mails (#160) jebusandTim Lorsbach 2025-10-16 02:24:51 +13:00
• 1f863fdcd6 [Fix] Remove Scenarios from Objects (#159) jebusandTim Lorsbach 2025-10-15 20:23:52 +13:00
• 1effaeb342 [Migration] EnzymeLink Migration (#158) jebusandTim Lorsbach 2025-10-15 19:57:03 +13:00
• 386098b8a6 [Feature] EnzymeLink Annotations (#152) jebusandTim Lorsbach 2025-10-15 19:35:26 +13:00
• ef697ac5f5 [Fix] Added UZH Affiliation, Update UoA Images (#153) jebusandTim Lorsbach 2025-10-15 19:25:23 +13:00
• 8d955d685c fixed XSS attack on pathway description and on scenario additional information fields. #72 Liam Brydon 2025-10-15 15:11:54 +13:00
• 17744294cc start towards #72. Added nh3 and fixed package description XSS attack Liam Brydon 2025-10-15 12:24:36 +13:00
• f76861a83f chore: migrate build commands to poe t03i 2025-10-13 21:24:51 +13:00
• 110fbe12c1 chore: update gitignore for pnpm t03i 2025-10-13 21:09:06 +13:00
• d8dc9598ff chore: add makefile integration and documentation t03i 2025-10-03 14:06:25 +13:00
• b7e4abae1c chore: add pnpm install to make t03i 2025-10-03 12:11:12 +13:00
• 2fa0be52ef Update commands to automatically run pnpm for relevant commands Tobias O 2025-10-02 15:51:23 +13:00
• be5ff369e0 Setup TailwindCSS and DaisyUI Tobias O 2025-10-02 15:50:54 +13:00
• ee776e7d14 refactor: ALLOWED_HOSTS throws exception if not present t03i 2025-10-04 17:07:04 +13:00
• f27bc56379 chore: Setup pre-commit to automatically run ruff on commit. t03i 2025-10-04 16:44:23 +13:00
• 547eac3411 chore: add basic ruff configuration with line lenght 100 t03i 2025-10-04 16:44:01 +13:00
• 9e66169d23 fix: fix docker compose command typo t03i 2025-10-03 12:12:04 +13:00
• 9a43942f12 docs: remove alternative install instructions for lower maintenance. t03i 2025-10-03 11:50:52 +13:00
• 1bad6e4b03 docs: add makefile and docker-compose for initial setup t03i 2025-10-03 11:41:43 +13:00
• ad38704ffe refactor: create local version of settings w/o postgres t03i 2025-10-02 17:55:02 +13:00
• 0775ad30d4 docs: add note on RDkit install painpoint t03i 2025-10-02 17:54:20 +13:00