7653561833
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CI / test (pull_request) Failing after 28s
API CI / api-tests (pull_request) Failing after 41s
2026-07-28 10:46:12 +02:00
1088586d9f
leftover
2026-07-28 10:04:07 +02:00
bbf4c54c12
Fix Secret image size in Navbar
2026-07-28 10:03:00 +02:00
448edb3d40
Adjust Group Auth Log
2026-07-28 10:02:47 +02:00
c0c0e969dc
Fix Package Adjustment
2026-07-28 09:54:05 +02:00
e09e1fe048
model stats
CI / test (pull_request) Failing after 28s
API CI / api-tests (pull_request) Failing after 44s
2026-07-26 21:06:46 +02:00
8b2caf3500
auth log for api
CI / test (pull_request) Failing after 29s
API CI / api-tests (pull_request) Failing after 41s
2026-07-26 20:54:35 +02:00
b9c3618c41
secret packs viz
CI / test (pull_request) Failing after 30s
API CI / api-tests (pull_request) Failing after 43s
2026-07-25 22:50:20 +02:00
9bf65d4319
...
CI / test (pull_request) Failing after 28s
API CI / api-tests (pull_request) Failing after 38s
2026-07-25 22:23:57 +02:00
d72676710a
auth log leftovers
2026-07-25 22:13:06 +02:00
aaa87c5f2f
Auth log
API CI / api-tests (pull_request) Failing after 30s
CI / test (pull_request) Failing after 32s
2026-07-23 23:31:07 +02:00
3241bc2648
sync
2026-07-23 23:31:07 +02:00
d5d7779d8e
wip
2026-07-23 23:31:07 +02:00
91d27025b9
View Package Perm
2026-07-23 23:31:07 +02:00
a17751be1f
Provide proper Error Pages
2026-07-23 23:31:07 +02:00
701bb3dd5f
adjusted migration
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Initial bayer app
Show Pack Classification
Adjusted docker compose to bayer specifics
Adjusted Dockerfile for Bayer
Adding secret flags to group, add secret pools to packages
Adjusted View for Package creation
Prep configs, added Package Create Modal
wip
More on PES
wip
wip
Wip
minor
PW interactions
API PES
wip
Make Select Widget reflect required
make required generallay available
Update UI if pathway mode is set to build
Added ais
circle adjustments
Initial Zoom, fix AD Creation
wip
auth log, bb4g fix
missing import
Added viz hint if PES is part of reaction
Add Edge check for pes
flip boolean
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pes
Added extra
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In / Out Edges Viz, Submitting Button Text
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Make PES Link clickable
Return proper http response instead of error
Fixed error return, removed unused options
Fix PES Link HTML for other entities
Fixed molfile assignment, adjusted Export
Package Export/Import cycle
highlight Description links
implemented non persistent
Harmonised proposed field in Json output
Added pesLink field to PW Api output
PES Fields in API Output
removed debug
Fix Classification import, Fix PES Deserialization
underline pes link in templates
Fix alter name/desc for node, make /node /edge funcitonal
provide setting link and copy button
Implemented Compound Names / Reaction Names View Option
Unconnected Nodes
Make links thicker, reduce timeout trigger time
Show proposed info in popover
Pathway Build no stereo removal
Include probs in reaction name option viz
Detect clicks outside nodes/edges
2026-07-23 23:31:06 +02:00
7632b3a029
[Fix] All thresholds, Increase Batch Predict Limit, Make "Back" Button on error page trigger a new pageload. ( #432 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#432
2026-07-24 09:29:05 +12:00
d657c0285a
[Fix] Catch invalid reactions smiles on reaction creation ( #431 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#431
2026-07-23 07:45:36 +12:00
f4c198981b
[Feature] SPathway to_json outputs Bayes Probabilities ( #430 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#430
2026-07-23 07:20:26 +12:00
cdd51fc7aa
[Fix] Iuclid export produce only one root substance ( #429 )
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Reviewed-on: enviPath/enviPy#429
Co-authored-by: Tobias O <tobias.olenyi@envipath.com >
Co-committed-by: Tobias O <tobias.olenyi@envipath.com >
2026-07-23 06:37:02 +12:00
ac8df05913
[Feature] Attach AdditionalInformation to Nodes ( #428 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#428
2026-07-20 09:32:28 +12:00
31c57299e4
[Feature] Ketcher V3 ( #427 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#427
2026-07-17 08:16:09 +12:00
3566571b42
[Chore] Leftovers ( #426 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#426
2026-07-16 21:33:12 +12:00
72a63b4876
[Feature] Sync Features from Client Repo ( #425 )
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- New PackageImporter
- Fix persisting Molfile on Structure creation
- Add NonPersistent Prediction
- Pathway View Options
- Edit Node Fix
Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#425
2026-07-16 07:50:46 +12:00
2c2437e3f5
[Feature] Generate Compounds by Molfile ( #423 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#423
2026-07-15 23:56:24 +12:00
9bc9f86ff1
[Fix] Pathway SVG Export has Edges again, Fix In/Out Edge coloring ( #422 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#422
2026-07-03 07:24:02 +12:00
dba6514013
[Chore] Package Export, Blanks for fields, Styling ( #421 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#421
2026-07-02 20:12:26 +12:00
a092d4a558
[Chore] Updated Dockerfile ( #418 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#418
2026-06-17 08:33:02 +12:00
2502c020f7
[Fix] Collection of minor Bugfixes ( #417 )
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User feedback from on-prem installation
Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#417
2026-06-17 07:56:32 +12:00
6ab9180291
[Feature] Vizualize Reaction Circles ( #410 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#410
2026-06-11 02:07:49 +12:00
3657d14659
[Fix] Cascade deletion of Reactions to Edges ( #409 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#409
2026-06-11 00:24:06 +12:00
ef6091d416
[Fix] Set depth to -1 when adding a Node via Pathway.add_node to be in sync with legacy_api ( #408 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#408
2026-06-09 23:55:16 +12:00
14cfc1e4d7
[Feature] Integrate DOI Links, Handle Cycles in Pathway Viz ( #407 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#407
2026-06-03 06:00:38 +12:00
868bbf5c05
[Fix] False as multi_step default in legacy API ( #406 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#406
2026-05-29 08:12:52 +12:00
be5ee1d1d7
[Fix] Propagate multi_step in Edge.create to Reaction.create to ensure deduplication is working ( #405 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#405
2026-05-29 07:39:32 +12:00
20fd949dfd
[Fix] Implement legacy PFASConfidence object construction ( #404 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#404
2026-05-28 23:57:34 +12:00
c9b643fe6e
[Feature] Make JobLog Page Paginated ( #403 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#403
2026-05-28 23:01:27 +12:00
1a9f1cf9af
[Fix] Legacy API Node Depth Parsing, description validation in Reaction.create ( #402 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#402
2026-05-28 09:53:39 +12:00
c7c7e17e43
[Feature] Implement legacy endpoints to enable copy via python client ( #400 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#400
2026-05-28 01:41:28 +12:00
674e10c7fa
[Fix] Legacy API Package Endpoint, Pepper Unit in Pathway View ( #399 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#399
2026-05-27 21:09:17 +12:00
8079b80d57
[Fix] Fix Typo in multi_step assignment ( #397 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#397
2026-05-21 09:56:21 +12:00
76e63fda2c
[Fix] Fix BART Upload ( #396 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#396
2026-05-21 03:16:02 +12:00
1e43c298d2
[Fix] Simplify Depth adjustment ( #386 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#386
2026-05-12 21:04:56 +12:00
b39fc7eaf8
[Fix] Update Node depth when adding new Edges to a Pathway ( #384 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#384
2026-05-12 09:40:35 +12:00
a2fc9f72cb
[Feature] Make use of HalfLifeModel Enum ( #383 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#383
2026-05-12 09:23:56 +12:00
734b02767e
[Fix] Update plotting imports and thread handling in Pepper class ( #382 )
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- plt.subplot does not work reliably with async/ threads.
- Bug in thread run that would fail with env set (string to number)
Reviewed-on: enviPath/enviPy#382
Co-authored-by: Tobias O <tobias.olenyi@envipath.com >
Co-committed-by: Tobias O <tobias.olenyi@envipath.com >
2026-05-12 06:43:26 +12:00
9d70db2ca2
[Fix] Wrong indentation in welcome mail ( #373 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#373
2026-04-22 08:47:05 +12:00
fec26d0233
[Feature] Admin Actions for Activation and Affiliation Request ( #372 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#372
2026-04-22 08:36:31 +12:00
689f7998eb
[Dep] Updated enviFormer, additional information lib, aiohttp, fsspec ( #371 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#371
2026-04-22 06:38:31 +12:00
8498e59fa1
[Feature] Changes required for non public tenants ( #370 )
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Co-authored-by: Tim Lorsbach <tim@lorsba.ch >
Reviewed-on: enviPath/enviPy#370
2026-04-22 06:08:39 +12:00
