8 Commits

Include renames

Author	SHA1	Message	Date
Tim Lorsbach	520fb9f510	Update UI if pathway mode is set to build	2026-06-09 10:24:00 +02:00
t03i	1c2f70b3b9	[Feature] Add batch-predict to site-map (#285) ... Adds batch predict to the site-map but does not give it prominence. This is to avoid non-experts "accidentally" flooding the system. Happy to move it to the main menu if better, @jebus? Reviewed-on: enviPath/enviPy#285 Co-authored-by: Tobias O <tobias.olenyi@envipath.com> Co-committed-by: Tobias O <tobias.olenyi@envipath.com>	2026-01-15 22:30:31 +13:00
t03iandTim Lorsbach	1a2c9bb543	[Feature] Modern UI roll out (#236) ... This PR moves all the collection pages into the new UI in a rough push. I did not put the same amount of care into these as into search, index, and predict. ## Major changes - All modals are now migrated to a state based alpine.js implementation. - jQuery is no longer present in the base layout; ajax is replace by native fetch api - most of the pps.js is now obsolte (as I understand it; the code is not referenced any more @jebus please double check) - in-memory pagination for large result lists (set to 50; we can make that configurable later; performance degrades at around 1k) stukk a bit rough tracked in #235 ## Minor things - Sarch and index also use alpine now - The loading spinner is now CSS animated (not sure if it currently gets correctly called) ## Not done - Ihave not even cheked the admin pages. Not sure If these need migrations - The temporary migration pages still use the old template. Not sure what is supposed to happen with those? @jebus ## What I did to test - opend all pages in browse, and user ; plus all pages reachable from there. - Interacted and tested the functionality of each modal superfically with exception of the API key modal (no functional test). --- This PR is massive sorry for that; just did not want to push half-brokenn state. @jebus @liambrydon I would be glad if you could click around and try to break it :) Finally closes #133 Co-authored-by: Tim Lorsbach <tim@lorsba.ch> Reviewed-on: enviPath/enviPy#236 Co-authored-by: Tobias O <tobias.olenyi@envipath.com> Co-committed-by: Tobias O <tobias.olenyi@envipath.com>	2025-11-26 23:16:44 +13:00
t03i	d584791ee8	[Fix] Ketcher submission now recognized (#213) ... This will hack the ketcher submission to work again (see #207). The problem seems to be that the iframe loads slower than the script tag so the reference is not available on page load. Registering from within the code to poll until ketcher is ready is a bit messy. Tracked the introduced dept in #212. Reviewed-on: enviPath/enviPy#213 Co-authored-by: Tobias O <tobias.olenyi@envipath.com> Co-committed-by: Tobias O <tobias.olenyi@envipath.com>	2025-11-13 23:27:29 +13:00
t03i	a7f48c2cf9	[Fix] Predict page scrolls to submit button (#209) ... Autofocus on form is automatically placed on cancel button. Now it is on Name. fixes #205 Reviewed-on: enviPath/enviPy#209 Co-authored-by: Tobias O <tobias.olenyi@envipath.com> Co-committed-by: Tobias O <tobias.olenyi@envipath.com>	2025-11-13 23:15:08 +13:00
t03iandTim Lorsbach	21d30a923f	[Refactor] Large scale formatting/linting (#193) ... All html files now prettier formatted and fixes for incompatible blocks applied Co-authored-by: Tim Lorsbach <tim@lorsba.ch> Reviewed-on: enviPath/enviPy#193 Co-authored-by: Tobias O <tobias.olenyi@envipath.com> Co-committed-by: Tobias O <tobias.olenyi@envipath.com>	2025-11-12 22:47:10 +13:00
t03iandjebus	d20a705011	[Feature] Add per-package pathway prediction (#195) ... ## Major Changes - Introduces a new view for per-package predictions Co-authored-by: jebus <lorsbach@envipath.com> Reviewed-on: enviPath/enviPy#195 Co-authored-by: Tobias O <tobias.olenyi@envipath.com> Co-committed-by: Tobias O <tobias.olenyi@envipath.com>	2025-11-12 22:01:34 +13:00
t03iandTim Lorsbach	c1553d9cd4	[Feature] Add Predict Pathway Page in Modern UI (#188) ... ## Major Changes - Predict Pathway is now a separate view as it is meant as adavanced prediction interface ## Current status  Co-authored-by: Tim Lorsbach <tim@lorsba.ch> Reviewed-on: enviPath/enviPy#188 Co-authored-by: Tobias O <tobias.olenyi@envipath.com> Co-committed-by: Tobias O <tobias.olenyi@envipath.com>	2025-11-12 02:38:57 +13:00